Session 6 · Analyse: from sample to answer

Week 6 · Saturday · online, 19:30–22:30 (3 hours, 15-minute break)

Date: 05/12/2026

Agenda

  • Recap quiz on Session 5 (10 min)
  • 6.1 From sample to population: CI, p-value, one- or two-sided, power, sample size, choosing a test
  • 6.2 Compare groups in the course dataset (live R demo)
  • 6.3 Relationships and models: regression, Kaplan-Meier and Cox
  • 6.4 Model the course dataset: adjusted OR, Cox HR, missing data, the SAP
  • Proposal builder 6: sample size, analysis plan, missing-data plan

Timetable

Start Clock* Min Segment
0:00 19:30 10 Recap quiz
0:10 19:40 40 6.1 From sample to population: CI, p-values & misinterpretations, one-sided vs two-sided tests, type I/II errors, power, sample size (5-minute live demo), choosing a test (decision table), paired vs unpaired, multiple comparisons
0:50 20:20 20 6.2 [DS] Compare groups in the course dataset: live demo (t-test / Mann-Whitney / chi-square); the class interprets the outputs together (Q1 in full, Q2 to Q5 briefly)
1:10 20:40 15 BREAK
1:25 20:55 35 6.3 Relationships and models: correlation, linear and logistic regression, adjustment, reading a regression table, overfitting, censoring and Kaplan-Meier curves (prediction/ML and interaction in the extra slides)
2:00 21:30 25 6.4 [DS] Model the course dataset: the SAP that was written before the analysis, crude vs adjusted OR (confounding by indication made visible), Kaplan-Meier + Cox HR, complete-case vs multiple imputation
2:25 21:55 30 Proposal builder 6: modelled live (sample size, analysis plan, confounders, missing-data plan); each participant drafts their own sample-size inputs (finished as homework)
2:55 22:25 5 Wrap-up

*Times are relative to the start of the session; the clock column shows Vietnam time for the online 19:30–22:30 session. All exercises are done by the whole class together (no groups). [DS] = course-dataset content (FLUID-ICU analysis and manuscript writing).

Slides

Open the slides full screen

Press F for full screen, S for speaker notes, E to print, Esc for an overview.

Downloads

Slides (PowerPoint) English · Tiếng Việt
Exercise sheet Read online · Word · PDF
Solutions Read online · PDF
Live-demo script Read online · PDF

Before this session

  • The Q1 results pack read (Table 1 and figures).
  • Proposal Part 3 started (variables table, mini-CRF, data-management plan).

After this session (homework)

  • Your proposal: finish Proposal Part 3 (sample size, analysis plan, missing-data plan).
  • Your manuscript: choose one question (Q1 to Q5), tell the course lead, and read its results pack.
  • Read Papers 1 and 2.
  • Start your 6 proposal slides (presentation guide).
  • Homework exercises on the Session 6 sheet (CIs and p-values, choose the test, match r, read a Kaplan–Meier curve, why is it missing?).